Tom Sercu

Vice President, AI And Engineering at Biohub

New York, New York, United States
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Summary

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Rockstar
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Tom Sercu is a seasoned AI and engineering leader with 12 years of experience building research-driven teams at the intersection of deep learning and biology. Currently Vice President, AI and Engineering at Biohub, he previously led Meta FAIR’s Protein team where he shipped landmark models like ESM, ESMFold and ESM Atlas and grew the group to ~15 engineers and scientists. He co-founded EvolutionaryScale to translate protein language-model advances into product, and his open-source contributions include improving usability and adding pretrained models and contact prediction to the widely used facebookresearch/esm repo. Tom’s background spans top research labs (Meta, IBM, NYU) and rigorous physics and data science training from Ghent University and NYU, giving him a strong foundation in both theory and applied ML. Colleagues describe him as a pragmatic researcher-engineer who moves models from publication to production while keeping developer experience and documentation front and center.
code12 years of coding experience
job10 years of employment as a software developer
bookMaster of Science (MS) Data Science, Master of Science (MS) Data Science at New York University
bookMaster of Science (M.Sc.) Engineering Physics/Applied Physics, Master of Science (M.Sc.) Engineering Physics/Applied Physics at Ghent University
bookErasmus exchange Physics, Erasmus exchange Physics at University of Stuttgart
languagesDutch, English, German, French
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Stackoverflow

Stats
13reputation
117reached
0answers
1question
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Github Skills (9)

bioinformatics10
transformer-models10
pytorch10
machine-learning10
deep-learning10
python10
documentation9
plot6
matplotlib6

Programming languages (7)

C++CCMakeJavaScriptLuaJupyter NotebookPython

Github contributions (5)

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facebookresearch/esm

Sep 2020 - Jan 2023

Evolutionary Scale Modeling (esm): Pretrained language models for proteins
Role in this project:
userML Engineer
Contributions:51 reviews, 88 commits, 56 PRs in 2 years 4 months
Contributions summary:Tom made significant contributions to the project by modifying existing code to improve the usability of the `extract.py` script. Further work was done to refine the README and notebook documentation, including adding example code for variant prediction. The user also added new pre-trained models and contact prediction functionality. These changes suggest a focus on model usability, documentation, and extending the capabilities of the ESM models.
scale-modelingproteinspretrained-language-modelsesmscale
tomsercu/Xtrac

Oct 2013 - May 2014

Contributions:101 commits in 6 months
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Tom Sercu - Vice President, AI And Engineering at Biohub