Toshiaki Katayama
Project Professor at National Institute of Genetics, Japan
Tokyo, Japan
Summary
👤
Senior🎓
Top SchoolToshiaki Katayama is a bioinformatics researcher and project professor with 25 years’ experience building interoperable life-science databases and tools from Tokyo. As a long-time leader at DBCLS and the BioData Science Initiative, he architects and maintains widely used platforms such as TogoWS, TogoGenome, TogoVar and RDF/-SPARQL tooling while organizing the international BioHackathon to drive community standards and integration. He founded the BioRuby project in 2000 and earlier contributed to KEGG and genome projects (including S. pombe and a tardigrade effort), blending hands-on software development with genomic research. Known for pragmatic open-source engineering, he pursues uncommon questions about the molecular boundary between active and cryptobiotic life—and in 2023 even had his own genome sequenced.
24 years of coding experience
20 years of employment as a software developer
Bioinformatics, Bioinformatics at Kyoto University
Github Skills (52)
json10
describe10
sparql-generate10
linked-data10
shacl10
sparql10
querying10
javascript9
visualization9
genome9
semantic-web9
knowledge-graph9
location9
genomics9
data-visualization9
Programming languages (12)
Github contributions (5)
ktym/metastanza
Apr 2018 - Oct 2019
Contributions:6 commits, 4 pushes, 1 branch in 1 year 6 months
med2rdf/hgnc
Dec 2017 - Jun 2024
Contributions:8 pushes, 1 branch in 6 years 6 months
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