Tycho Kirchner
Software-Entwickler at Leibniz-Institut für Alternsforschung - Fritz-Lipmann-Institut e.V. (FLI)
Weimar, Thuringia, Germany
Summary
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Senior🎓
Top SchoolTycho Kirchner is a pragmatic software developer with about eight years of experience building low- and high-level systems in C++, C, Python, Java and C#, spanning user- and kernel-space. He develops instrument control and data-processing software for lasers and spectrometers and applies bioinformatics expertise to RNA-seq and gene expression tools. Tycho is the author of shournal, a shell-tracking tool published in Scientific Reports that addresses reproducibility and whose code is available on GitHub. Based in Weimar, he favors stable, high-performance FOSS solutions and bridges research-grade tooling with production-ready engineering.
8 years of coding experience
3 years of employment as a software developer
Master of Science - MS, Bioinformatics, 1,4, Master of Science - MS, Bioinformatics, 1,4 at Friedrich Schiller University JenaBachelor of Science - BS, Informatics, 1,6, Bachelor of Science - BS, Informatics, 1,6 at Fachhochschule ErfurtBachelor of Engineering - BE, Medizintechnik, 2,0, Bachelor of Engineering - BE, Medizintechnik, 2,0 at Ernst-Abbe-Hochschule Jena
Github Skills (157)
blast10
bash10
structural-variation10
clipboard10
genomics10
matrix10
reproducible-science10
reproducible-research10
kaios10
serial-port10
bioinformatics10
twine10
javascript9
linux9
shell9
Programming languages (13)
Github contributions (5)
snakemake/shournal-to-snakemake
Apr 2020 - May 2024
Contributions:1 push, 1 branch, 1 comment in 4 years 2 months
Hoffmann-Lab/shournal
Jan 2024 - Mar 2025
Log shell-commands and used files. Snapshot executed scripts. Fully automatic.
Contributions:1 release, 4 pushes in 1 year 2 months
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