Vedran Kasalica
Data And Tools Interoperability Expert
Randstad, Netherlands
Summary
👤
Senior🎓
Top SchoolVedran Kasalica is a Data and Tools Interoperability expert and research software engineer with nine years’ experience building open-source, ML-driven tooling for bioinformatics and medicine. He has led multidisciplinary projects at the Netherlands eScience Center—shipping platforms like Workflomics, Paradigma and FAIVOR and a deep-learning survival predictor—while integrating solutions across HPC and cloud environments. His PhD in Computer Science and joint master’s training in computational logic underpin a pragmatic focus on reproducible, automated workflows (notably APE, a logic-based Java API/CLI used by multiple labs). He combines hands-on engineering, stakeholder engagement and mentoring with product experience from co-founding a mobile tourism app, showing an ability to move ideas from research to deployed software.
9 years of coding experience
6 years of employment as a software developer
Joint Master’s Degree, Computational Logic, Joint Master’s Degree, Computational Logic at Technische Universität DresdenJoint Master’s Degree, Computational Logic, Joint Master’s Degree, Computational Logic at Free University of Bozen - BolzanoJoint Master’s Degree, Computational logic, Joint Master’s Degree, Computational logic at Universidade Nova de LisboaBachelor's degree, Computer Science, Bachelor's degree, Computer Science at University of MontenegroDoctor of Philosophy - PhD, Computer Science, Doctor of Philosophy - PhD, Computer Science at Utrecht University
English, Italian, Serbian, Spanish, Dutch
Github Skills (49)
ape10
boilerplate8
open-access8
cycle8
pipeline8
java8
gitbook8
journal8
identifier8
academia7
ontology7
creative-commons6
science6
graphviz6
python6
Programming languages (13)
Github contributions (5)
sanctuuary/APE
Jun 2018 - Dec 2022
Contributions:23 releases, 10 reviews, 396 commits in 4 years 6 months
pipelineapeprogram-synthesisjavaexplorer
Workflomics/tools-and-domains
May 2023 - Feb 2025
Containers to package the required sofware for executing CWL workflows
Contributions:22 reviews, 35 PRs, 78 pushes in 1 year 8 months
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