Vincent Gardeux
Senior Scientist at EPFL (École polytechnique fédérale de Lausanne)
Ecublens, Vaud, Switzerland
Summary
👤
Senior🎓
Top SchoolVincent Gardeux is a Senior Scientist at EPFL with over a decade of experience applying machine learning to NGS data analysis, translational bioinformatics, and precision medicine. He focuses on decoding molecular networks and the functional impact of non-coding genetic variation to link genotype to complex phenotypes. Vincent blends rigorous research with hands-on teaching—lecturing courses in Genetics & Genomics and Single-cell Biology while designing applied R-based mini-projects that train students on realistic bioinformatics problems. His background spans academic and consulting roles across Europe and the US, including positions at the University of Arizona, UIC, and Alithea Genomics, reflecting both deep research and practical implementation experience. Known for merging computational rigor from his PhD in computer science with biological insight, he often emphasizes interpretable models and pathway-level mechanisms rather than black-box predictions.
10 years of coding experience
7 years of employment as a software developer
Master's Degree, Computer Science, Master's Degree, Computer Science at Ecole internationale des Sciences du Traitement de l'InformationPh.D., Computer Science, Ph.D., Computer Science at Université Paris-Est Créteil (UPEC)Prep. School (Mathematics, Physics and Engineering), Prep. School (Mathematics, Physics and Engineering) at Lycée Pissaro
French, English
Github Skills (63)
spark-ml10
genome10
seq10
gene-expression10
sequencing10
rna-seq10
bioinformatics10
genomics10
python-bindings9
dimensionality-reduction9
spark9
genetic9
single-cell-analysis9
gatk9
infer9
Programming languages (7)
Github contributions (5)
DeplanckeLab/BRB-seqTools
Nov 2017 - Mar 2022
Suite of tools for processing BRB-seq data
Contributions:5 releases, 26 commits, 1 PR in 4 years 4 months
suiteseq
DeplanckeLab/ASAP
Mar 2017 - Dec 2021
Contributions:2 releases, 41 commits, 62 pushes in 4 years 9 months
Find and Hire Top DevelopersWe’ve analyzed the programming source code of over 60 million software developers on GitHub and scored them by 50,000 skills. Sign-up on Prog,AI to search for software developers.