Wenwen Huo
Postdoctoral Scholar at Tufts University
Boston, Massachusetts, United States
Summary
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Top SchoolWenwen Huo is a postdoctoral scholar and bioinformaticist based in Boston with eight years of experience dissecting antibiotic resistance in Gram-negative bacteria through a blend of wet-lab experiments and computational genomics. At Tufts she combines WGS and RNA-seq analysis with custom pipelines and algorithm development to mine public databases for resistance-associated genomic changes. Trained at Tsinghua and with a PhD from UT Dallas, she pairs meticulous experimental troubleshooting with object-oriented Python programming and statistical analysis of large transcriptional datasets. Highly collaborative across bioengineering, clinical, and computational teams, she is also an experienced mentor and an invited speaker at national conferences. A notable strength is translating bench observations into scalable bioinformatics workflows that reveal mechanistic insights into pathogen adaptation.
7 years of coding experience
1 year of employment as a software developer
Doctor of Philosophy - PhD, Cell/Cellular and Molecular Biology, Doctor of Philosophy - PhD, Cell/Cellular and Molecular Biology at The University of Texas at DallasBachelor's degree, Biology/Biological Sciences, General, Bachelor's degree, Biology/Biological Sciences, General at Tsinghua University
English, Chinese
Github Skills (17)
genome10
pathogen10
genome-annotation10
zap9
bioinformatics9
rapid9
genomics9
sigmoid5
genes4
curve4
bacteria4
seq2
quantile2
lda1
numerical1
Programming languages (3)
Github contributions (5)
huoww07/Bioinformatics-for-RNA-Seq
Apr 2020 - Jun 2020
A Tufts University Research Technology Workshop
Contributions:81 commits, 7 PRs, 77 pushes in 1 month
research-technologyworkshop
huoww07/calulate_bacteria_doubling_time
Nov 2019 - Apr 2022
Calculate bacteria doubling time from growth curve using fitted curve of sigmoid function
Contributions:2 PRs, 20 pushes, 2 branches in 2 years 5 months
bacteriasigmoidcurvecalculatesigmoid-function
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