Ye Wang
Assistant Research Fellow at Chengdu Research Base of Giant Panda Breeding
Chengdu, Sichuan, China
Summary
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Senior🎓
Top SchoolYe Wang is an Assistant Research Fellow with nine years of experience at the intersection of animal sciences and bioinformatics, currently applying computational genomics to conservation genetics of giant pandas at the Chengdu Research Base. Trained with dual PhDs in Bioinformatics and Animal Genetics, Ye specializes in genome evolution and quantitative genetics, and has a strong track record analyzing WGS, RNA-seq, ChIP-seq and metagenomic data. He builds robust, reproducible analysis pipelines with Nextflow and is fluent in R, Python, Nim, Bash and Groove, routinely deploying workflows on HPC and cloud Linux environments. Beyond routine analysis, Ye brings practical engineering rigor—optimizing pipelines for scale and reproducibility—to conservation projects where clear computational strategies directly inform breeding and management decisions.
8 years of coding experience
1 year of employment as a software developer
Doctor of Philosophy - PhD, Animal Genetics and Reproduction, Doctor of Philosophy - PhD, Animal Genetics and Reproduction at Sichuan Agricultural UniversityPh.D, Bioinformatics, Ph.D, Bioinformatics at Northwestern University
Github Skills (29)
reproducible-research10
reproducible-science10
bioinformatics10
singularity9
dsl9
dataflow9
slurm9
nextflow9
pipeline-framework9
groovy9
samtools9
docker9
pipeline9
aws9
bcftools9
Programming languages (7)
Github contributions (5)
AndersenLab/SEmRNA-seq-nf
Jan 2018 - Sep 2018
Contributions:2 PRs, 61 pushes, 1 branch in 8 months
bioinformaticsmrnapipelineseq
faithman/coding-notes
Apr 2021 - Dec 2024
Contributions:15 pushes, 2 branches in 3 years 7 months
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