Yevhen Vainshtein
Bioinformatics Scientist
Stuttgart, Baden-Württemberg, Germany
Summary
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Senior🎓
Top SchoolYevhen Vainshtein is a bioinformatics scientist with nine years of professional experience designing and implementing computational solutions at the interface of biology and computer science. Based in Stuttgart, he develops automated pipelines, custom analysis tools, and statistical methods for high-throughput data including microarrays and NGS, supporting projects end-to-end from quality assessment to visualization. His background spans leading European research institutions (Fraunhofer IGB, EMBL, DKFZ, MPI) where he built reproducible workflows for ChIP-Seq/RNA-Seq/MNase-Seq and specialized packages such as an “Iron Chip” analysis toolkit. With a PhD in Bioinformatics and an MS/BS in Molecular Biophysics from MIPT, he blends deep domain knowledge with practical software engineering to make complex genomic analyses robust and accessible. Colleagues rely on him for bioinformatics training and for translating biological questions into automated, auditable computational pipelines. An underappreciated strength is his long track record of creating MIAME-compliant and REST-enabled tools that bridge experimental labs and data-driven workflows.
9 years of coding experience
15 years of employment as a software developer
Doctor of Philosophy - PhD, Bioinformatics, Doctor of Philosophy - PhD, Bioinformatics at Universität WürzburgMaster of Science - MS, Molecular Biophysics, Master of Science - MS, Molecular Biophysics at Moscow Institute of Physics and Technology (State University) (MIPT)
English, German, Russian, Ukrainian
Github Skills (38)
next-generation-sequencing9
genome-assembly9
sequencing9
occupancy9
illumina9
genome8
bioinformatics8
nmf7
assembler7
biodiversity7
throughput7
sequence7
genomics7
sequence-alignment6
biology6
Programming languages (3)
Github contributions (5)
homeveg/nuctools
Oct 2016 - Nov 2019
Contributions:169 commits, 5 PRs, 177 pushes in 3 years 1 month
chromatinsequencing-dataoccupancyhigh-throughput-sequencingsequencing
epigenereg/nuctools
Jan 2017 - Jan 2017
Contributions:1 push in 1 day
chromatinsequencing-dataoccupancyhigh-throughput-sequencingsequencing
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