Yuxiang Tan
Assistant Professor at Shenzhen Institutes of Advanced Technology
Shenzhen, Guangdong Province, China
Summary
👤
Senior🎓
Top SchoolYuxiang Tan is an assistant professor and bioinformatician with 11 years of experience building algorithms, databases and reproducible pipelines to analyze microbiome and transcriptomic sequencing data. He has developed a strain decomposition algorithm for metagenomics, primer coverage databases, and sensitive 16S and fusion-detection workflows that have been applied to infant microbiome development and antibiotic recovery studies. Based in Shenzhen and trained at Boston University and Illinois Tech, he blends rigorous computational method development with hands-on collaboration with clinicians to design efficient studies and validate targets. Independently minded, he balances academic research with on-demand bioinformatics support across multiple groups, translating complex NGS problems into practical, clinically relevant solutions. A detail that often goes unnoticed: his background spans both diagnostic kit development and LC/MS glycan recognition software, giving him uncommon cross-platform insight into experimental and computational assay design.
11 years of coding experience
8 years of employment as a software developer
Master's degree, Biotechnology, Master's degree, Biotechnology at Illinois Institute of TechnologyBachelor of Science (BS), Life science and biotechnology, Bachelor of Science (BS), Life science and biotechnology at Sun Yat-Sen UniversityDoctor of Philosophy (Ph.D.), Bioinformatics, Doctor of Philosophy (Ph.D.), Bioinformatics at Boston University, Bioinformatics ProgramGuangzhou No.2 Middle School
English, Chinese, Chinese
Github Skills (28)
composition10
bioinformatics10
package-management7
conda7
bioconda7
python6
fusion5
linux5
meta3
ecosystem3
graph2
computational-biology2
package-manager2
bash1
resumable-upload1
Programming languages (4)
Github contributions (5)
yuxiangtan/QueryFuse
May 2015 - Jul 2015
Contributions:35 commits, 1 PR, 21 pushes in 2 months
bioinformaticsgenefusionfusion-detection
yuxiangtan/SimFuse
Aug 2015 - May 2019
Contributions:15 commits, 10 pushes, 1 branch in 3 years 9 months
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