Zongtai Qi
Senior Bioinformatics Scientist
Pennsylvania, United States
Summary
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Senior🎓
Top SchoolZongtai Qi is a Senior Bioinformatics Scientist with eight years of experience building end-to-end pipelines and analytical tools for bulk and single-cell NGS, currently applying his expertise to precision oncology at Exact Sciences. He combines hands-on algorithm development for MRD detection with clinical single-cell multi-omics to map rare residual disease and inform immunotherapy and cell/gene therapy safety. Zongtai holds a PhD in Genomics and is a named inventor on a US patent for a single-cell “Calling Cards” sequencing method, reflecting his strength in genomic technology development as well as software and pipeline engineering. He is the author of scModules, an R package that streamlines integrated scRNA-seq and scTCR-seq analyses and demonstrates his focus on semi-automated, reproducible workflows. Colleagues rely on him to translate complex single-cell datasets into clinically actionable insights while advancing tools that bridge research and translational medicine.
8 years of coding experience
9 years of employment as a software developer
Doctor of Philosophy (PhD) Genomics, Doctor of Philosophy (PhD) Genomics at Washington University in St. LouisMaster of Science (M.S.) Pharmacy, Master of Science (M.S.) Pharmacy at China Pharmaceutical University
Github Skills (2)
bioinformatics2
umi1
Programming languages (1)
Github contributions (5)
qizongtai/CallingCard_pipelineV1
Oct 2017 - Feb 2022
Contributions:74 pushes, 1 branch in 4 years 4 months
qizongtai/LINE1_gemomic_alignment_and_clustering
Oct 2017 - Jan 2022
Contributions:43 commits, 41 pushes, 1 branch in 4 years 3 months
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